Mass Spectrometry Tool

Contents:

  • About MIMI
  • Usage Guide
  • Architecture Design
  • Command Reference
  • mimi package
  • License
Mass Spectrometry Tool
  • MIMI Documentation
  • View page source

MIMI Documentation

_images/CGSB-Logo.png

MIMI (Molecular Isotope Mass Identifier) is a powerful tool for analyzing isotope-labeled FT-ICR mass spectrometry data, developed in the Center for Genomics and Systems Biology (CGSB) at New York University Abu Dhabi (NYUAD).

Contents:

  • About MIMI
    • Key Features
    • License
    • Report Issues
  • Usage Guide
    • Installation
    • Workflow Overview
    • Step1: Database Preparation
    • Step2: Cache Creation
    • Step3: Sample Analysis
    • Comprehensive Analysis Runs
    • Troubleshooting
    • Complete Example
  • Architecture Design
    • Overview
    • Detailed Flow Diagram
    • Core Components
    • Data Flow
    • Key Design Principles
    • Implementation Details
  • Command Reference
    • mimi_kegg_extract
    • mimi_hmdb_extract
    • mimi_cache_create
    • mimi_cache_dump
    • mimi_mass_analysis
  • mimi package
    • mimi.analysis module
    • mimi.atom module
    • mimi.molecule module
  • License

Indices and tables

  • Index

  • Module Index

  • Search Page

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© Copyright 2025, Nabil Rahiman.

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